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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840869.1_cds_XP_016507776.1_20869
CDS Infomation

[gene=LOC107825429] [db_xref=GeneID:107825429] [protein=probable protein phosphatase 2C 60] [protein_id=XP_016507776.1] [location=complement(join(2838..3068,4431..4485,4589..4641,6528..6604,7280..7403,7846..7971,8425..8578,9482..9590,10689..10752,11723..11839))] [gbkey=CDS]
Sequence

ATGGGTATATACCTCAGTTCCCCCAAAACAGAGAAATTCTCAGAAGATGGTGAGAATGCT
AGGGTAAGATATGGTTTATCATCAATGCAAGGATGGCGTGCAACAATGGAAGATGCTCAT
GCAGCAATACCTGATTTGGATGCTTCAACATCCTTTTTTGGTGTCTATGATGGTCACGGA
GGTAAAGTTGTTGCTAAATTCTGTGCCAAGTATCTACATCAACAAGTGCTCAAGCATGAA
GCATATTTACATGGTGATATAGGAACTTCAGTCCAGAAAGCCTTTTTCAGAATTGATGAG
ATGATGCGTGGTCAGAGAGGATGGAGGGAGCTGGCTGCACTAGGGGATAAATTAAACAAG
TTCACGGGTATGATAGAGGGTCTTATTTGGTCTCCAAAAAATGGTGATGGAAACAACCAT
GTTGATGATTGGGCATTTGAGGAGGGGCCTCACTCTGATTTTTCTGGGCCTACTTCTGGA
TGTACGGCTTGTGTTGCAATCATGAGAGGGAACCAACTCATTGTTTCAAATGCTGGTGAC
TCTCGCTGTGTAATTTCAAGGAAGGGCCAGGCATACAATTTATCGAGGGATCATAAACCT
GATCTTGAGGTTGAGAGAGAGAGAATTTTAAAAGCTGGTGGTTTTATTCATGCAGGACGT
GTGAATGGAAGTCTAAATCTTGCAAGAGCTATAGGTGACATGGAATTCAAGCAGAACAAG
TTTTTGCCAGCTGAGAAGCAAATTGTAACTGCCAATCCAGATATAAACACTGTTGAGCTG
TGCGATGATGATAATTTTATTGTGCTAGCGTGTGATGGTATATGGGACTGTATGTCCAGC
CAGCAACTGGTGGATTTTATACACGAGCAGCTGAAGTCGGAAAGCAAGCTTTCTGCAGTA
TGTGAAAGAGTTCTCGATAGGTGTTTGGCACCTTCTACTGCTGGAGGTGAAGGATGTGAC
AACATGACCATGATTTTGGTGCAATTCAAGAAGCCTTTTCAGTCTGGGGCTTCTGCAGTT
GAAGAACTCCCAGCTTCTAGCGAGACACTCCCTGCTTCCGACGAGGCTACCAATGAAACA
AAACCAGCAGAGTGTGGATCAAGTTCGTAG

Peptide Sequence

PEP ID

XP_016507776.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 60 [Nicotiana tabacum]
Sequence

MGIYLSSPKTEKFSEDGENARVRYGLSSMQGWRATMEDAHAAIPDLDASTSFFGVYDGHG
GKVVAKFCAKYLHQQVLKHEAYLHGDIGTSVQKAFFRIDEMMRGQRGWRELAALGDKLNK
FTGMIEGLIWSPKNGDGNNHVDDWAFEEGPHSDFSGPTSGCTACVAIMRGNQLIVSNAGD
SRCVISRKGQAYNLSRDHKPDLEVERERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK
FLPAEKQIVTANPDINTVELCDDDNFIVLACDGIWDCMSSQQLVDFIHEQLKSESKLSAV
CERVLDRCLAPSTAGGEGCDNMTMILVQFKKPFQSGASAVEELPASSETLPASDEATNET
KPAECGSSS

Transcript Sequence

Gene sequence data has not been registered.